cellmap_flow.cli.infer
======================

.. py:module:: cellmap_flow.cli.infer

.. autoapi-nested-parse::

   ``cellmap_flow infer <type>``: start a model's inference server, then open
   the viewer on its predictions and serve the dashboard.

   There is a subcommand for each model type (``models.registry``), built when
   click asks for it. It takes the type's constructor arguments as options
   (``registry.click_options``), and the dataset (``-d``), queue (``-q``),
   billing project (``-P``), ``--resample``, ``--server-check`` and ``--env``
   (the environment the server runs in, ``models.envs``) as its own.

   ``run``, the generic form before 0.3.0 (``cellmap_flow run -m TYPE -c
   key=value``), is a deprecated alias: it says which ``infer`` command it
   stands for, and runs it.



Attributes
----------

.. autoapisummary::

   cellmap_flow.cli.infer.logger
   cellmap_flow.cli.infer.infer


Functions
---------

.. autoapisummary::

   cellmap_flow.cli.infer.run_generic
   cellmap_flow.cli.infer.create_dynamic_command


Module Contents
---------------

.. py:data:: logger

.. py:function:: run_generic(ctx, model_type, data_path, queue, project, config, server_check)

   ``cellmap_flow run -m TYPE -c key=value``, the form before 0.3.0:
   ``cellmap_flow infer TYPE --key value``, which it prints and runs.


.. py:function:: create_dynamic_command(cli_name: str, config_class: Type[cellmap_flow.models.models_config.ModelConfig])

   Dynamically create a Click command for a ModelConfig subclass.


.. py:data:: infer