Available Data#
The training crops used in the CellMap Segmentation Challenge are derived from 23 distinct eFIB-SEM datasets, including 9 cell culture samples and 14 tissue samples. These samples come from a variety of organisms, including mouse (10 datasets), Drosophila (2 datasets), zebrafish (1 dataset), and human (1 dataset). The tissue types span key biological regions and organs such as the brain, heart, liver, kidney, and pancreas, providing a broad spectrum of biological contexts for participants to work with.
Below is a list of available data for the segmentation challenge. You can visualize crops groupped by collection in neuroglancer by clicking on the link in the “Neuroglancer URL” column.
Each crop can be visualized separately in this table by clicking on the “Neuroglancer URL” link in the table below.