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Experiment Timeline Dashboard

Machine Learning Model Training Experiments Across Biological Groups

Tracking and visualizing the progress of machine learning experiments designed to automatically segment cellular organelles from high-resolution electron microscopy data. Our mission is to advance automated image analysis for biological discovery through systematic model training and evaluation.

73 Total Experiments
7 Currently Running
66 Completed
6 Experiment Groups

Interactive Data Visualizations

Explore comprehensive visualizations of our machine learning experiment timeline, performance metrics, and training progress across different biological datasets.

📅 Interactive Timeline

Explore the chronological progression of all experiments with detailed hover information, group-based color coding, and real-time status updates.

View Timeline

📊 Gantt Chart

Visualize experiment durations, overlaps, and training periods in a comprehensive timeline format showing real training dates and progress.

View Gantt Chart

📈 Statistics Dashboard

Comprehensive statistics and breakdowns by experiment group, model type, organelle targets, and training configurations.

View Statistics

�️ Dataset Usage

Analyze dataset and crop usage across all experiments, identify most frequently used datasets, and track data distribution.

View Dataset Stats

🎯 Model Scores by Organelle

Clear, easy-to-read bar charts showing F1 scores for each organelle. Separate pages for each organelle type with detailed rankings.

View Scores

🏆 Best Performing Models

Quick reference table showing the top F1 score achieved for each organelle with setup and iteration information.

View Best Scores

� Training Progression

Track how F1 scores improve across training iterations. See which setups learn faster and when performance plateaus.

View Progression

�🗃️ Raw Dataset

Access the complete experiment metadata in CSV format for custom analysis, including training parameters and performance metrics.

Download CSV

📋 Data Usage YAML

Detailed crop-level dataset usage information in YAML format, showing exact crops used per experiment.

Download YAML

🌐 OpenOrganelle Portal

Explore our interactive data portal with high-resolution EM images and annotations used for training these models.

Visit Portal

📚 Documentation

Detailed technical documentation about experiment configurations, model architectures, and training methodologies.

Read Documentation