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CellMap Segmentation Challenge - Home CellMap Segmentation Challenge - Home
  • CellMap Segmentation Challenge

Data:

  • CellMap Schemas
  • Available Data
  • Annotation Classes

Train:

  • Creating a CellMap Data PyTorch Dataloader
  • Loading a Pretrained Model Checkpoint

Evaluation:

  • Evaluation
  • Submission Data Format
  • Evaluation Resampling

Visualization:

  • Visualization
  • .rst

cellmap_segmentation_challenge.cli package

Contents

  • Submodules
  • cellmap_segmentation_challenge.cli.datasplit module
  • cellmap_segmentation_challenge.cli.evaluate module
  • cellmap_segmentation_challenge.cli.fetch_data module
  • cellmap_segmentation_challenge.cli.predict module
  • cellmap_segmentation_challenge.cli.process module
  • cellmap_segmentation_challenge.cli.speedtest module
  • cellmap_segmentation_challenge.cli.train module
  • cellmap_segmentation_challenge.cli.visualize module
  • Module contents

cellmap_segmentation_challenge.cli package#

Submodules#

cellmap_segmentation_challenge.cli.datasplit module#

cellmap_segmentation_challenge.cli.evaluate module#

cellmap_segmentation_challenge.cli.fetch_data module#

cellmap_segmentation_challenge.cli.predict module#

cellmap_segmentation_challenge.cli.process module#

cellmap_segmentation_challenge.cli.speedtest module#

cellmap_segmentation_challenge.cli.train module#

cellmap_segmentation_challenge.cli.visualize module#

Module contents#

Contents
  • Submodules
  • cellmap_segmentation_challenge.cli.datasplit module
  • cellmap_segmentation_challenge.cli.evaluate module
  • cellmap_segmentation_challenge.cli.fetch_data module
  • cellmap_segmentation_challenge.cli.predict module
  • cellmap_segmentation_challenge.cli.process module
  • cellmap_segmentation_challenge.cli.speedtest module
  • cellmap_segmentation_challenge.cli.train module
  • cellmap_segmentation_challenge.cli.visualize module
  • Module contents

By Jeff Rhoades, Emma Avetissian, Davis Vann Bennett, Marwan Zouinkhi

© Copyright 2024, Jeff Rhoades, Emma Avetissian, Davis Vann Bennett, Marwan Zouinkhi.