cellmap_flow.globals
Attributes
Classes
Functions
|
Load server config from cache file. Returns None if not found. |
|
Save server config to cache file. |
Module Contents
- cellmap_flow.globals.logger
- cellmap_flow.globals.SERVER_CONFIG_PATH
- cellmap_flow.globals.SERVER_CONFIG_DEFAULTS
- cellmap_flow.globals.SERVER_CONFIG_KEYS = ['queue', 'charge_group', 'nb_cores_master', 'nb_cores_worker', 'nb_workers']
- cellmap_flow.globals.load_server_config_cache() Dict[str, Any] | None
Load server config from cache file. Returns None if not found.
- cellmap_flow.globals.save_server_config_cache(config: Dict[str, Any]) None
Save server config to cache file.
- cellmap_flow.globals.input_norms = []
- cellmap_flow.globals.postprocess = []
- cellmap_flow.globals.viewer = None
- class cellmap_flow.globals.Flow
- jobs: List[Any]
- models_config: List[Any]
- servers: List[Any]
- raw: Any | None
- input_norms: List[Any]
- postprocess: List[Any]
- viewer: Any | None
- dataset_path: str | None
- model_catalog: dict
- queue: str
- charge_group: str
- nb_cores_master: int
- nb_cores_worker: int
- nb_workers: int
- tmp_dir: str | None
- blockwise_tasks_dir: str | None
- neuroglancer_thread: Any | None
- pipeline_inputs: List[Any]
- pipeline_outputs: List[Any]
- pipeline_edges: List[Any]
- pipeline_normalizers: List[Any]
- pipeline_models: List[Any]
- pipeline_postprocessors: List[Any]
- shaders: dict
- shader_controls: dict
- to_dict()
- save_server_config()
Save current server config attributes to cache.
- get_output_dtype(model_output_dtype)
- classmethod run(zarr_path, model_configs, queue='gpu_h100', charge_group='cellmap', input_normalizers=None, post_processors=None)
- classmethod stop()
- classmethod delete()
- cellmap_flow.globals.g