cellmap_flow.server

Attributes

logger

Classes

CellMapFlowServer	Flask application hosting a "virtual N5" for Neuroglancer.
DummyConfig

Functions

get_process_dataset(dataset)

Module Contents

cellmap_flow.server.logger

cellmap_flow.server.get_process_dataset(dataset: str)

class cellmap_flow.server.CellMapFlowServer(dataset_name: str, model_config: cellmap_flow.utils.data.ModelConfig)

Flask application hosting a “virtual N5” for Neuroglancer. All routes are defined via Flask decorators for convenience.

read_block_shape

n5_block_shape

input_voxel_size

output_voxel_size

output_channels

inferencer

idi_raw

refresh_rate_seconds = 5

previous_refresh_time = 0

chunk_encoder

app

run(debug=False, port=None, certfile=None, keyfile=None)

Run the Flask dev server with optional SSL certificate.

class cellmap_flow.server.DummyConfig

block_shape = (32, 32, 32)

output_voxel_size = (4, 4, 4)

output_channels = 1