API Reference
This page contains auto-generated API reference documentation [1].
- dacapo
- dacapo.apply
- dacapo.blockwise
- dacapo.compute_context
- dacapo.experiments
- dacapo.experiments.architectures
- dacapo.experiments.architectures.architecture
- dacapo.experiments.architectures.architecture_config
- dacapo.experiments.architectures.cnnectome_unet
- dacapo.experiments.architectures.cnnectome_unet_config
- dacapo.experiments.architectures.dummy_architecture
- dacapo.experiments.architectures.dummy_architecture_config
- dacapo.experiments.arraytypes
- dacapo.experiments.arraytypes.annotations
- dacapo.experiments.arraytypes.arraytype
- dacapo.experiments.arraytypes.binary
- dacapo.experiments.arraytypes.distances
- dacapo.experiments.arraytypes.embedding
- dacapo.experiments.arraytypes.intensities
- dacapo.experiments.arraytypes.mask
- dacapo.experiments.arraytypes.probabilities
- dacapo.experiments.datasplits
- dacapo.experiments.datasplits.datasets
- dacapo.experiments.datasplits.datasets.arrays
- dacapo.experiments.datasplits.datasets.arrays.array_config
- dacapo.experiments.datasplits.datasets.arrays.binarize_array_config
- dacapo.experiments.datasplits.datasets.arrays.concat_array_config
- dacapo.experiments.datasplits.datasets.arrays.constant_array_config
- dacapo.experiments.datasplits.datasets.arrays.crop_array_config
- dacapo.experiments.datasplits.datasets.arrays.dummy_array_config
- dacapo.experiments.datasplits.datasets.arrays.dvid_array_config
- dacapo.experiments.datasplits.datasets.arrays.intensity_array_config
- dacapo.experiments.datasplits.datasets.arrays.logical_or_array_config
- dacapo.experiments.datasplits.datasets.arrays.merge_instances_array_config
- dacapo.experiments.datasplits.datasets.arrays.missing_annotations_mask_config
- dacapo.experiments.datasplits.datasets.arrays.ones_array_config
- dacapo.experiments.datasplits.datasets.arrays.resampled_array_config
- dacapo.experiments.datasplits.datasets.arrays.sum_array_config
- dacapo.experiments.datasplits.datasets.arrays.tiff_array_config
- dacapo.experiments.datasplits.datasets.arrays.zarr_array_config
- dacapo.experiments.datasplits.datasets.dataset
- dacapo.experiments.datasplits.datasets.dataset_config
- dacapo.experiments.datasplits.datasets.dummy_dataset
- dacapo.experiments.datasplits.datasets.dummy_dataset_config
- dacapo.experiments.datasplits.datasets.graphstores
- dacapo.experiments.datasplits.datasets.raw_gt_dataset
- dacapo.experiments.datasplits.datasets.raw_gt_dataset_config
- dacapo.experiments.datasplits.datasets.simple
- dacapo.experiments.datasplits.datasets.arrays
- dacapo.experiments.datasplits.datasplit
- dacapo.experiments.datasplits.datasplit_config
- dacapo.experiments.datasplits.datasplit_generator
- dacapo.experiments.datasplits.dummy_datasplit
- dacapo.experiments.datasplits.dummy_datasplit_config
- dacapo.experiments.datasplits.keys
- dacapo.experiments.datasplits.simple_config
- dacapo.experiments.datasplits.train_validate_datasplit
- dacapo.experiments.datasplits.train_validate_datasplit_config
- dacapo.experiments.datasplits.datasets
- dacapo.experiments.model
- dacapo.experiments.run
- dacapo.experiments.run_config
- dacapo.experiments.starts
- dacapo.experiments.tasks
- dacapo.experiments.tasks.affinities_task
- dacapo.experiments.tasks.affinities_task_config
- dacapo.experiments.tasks.distance_task
- dacapo.experiments.tasks.distance_task_config
- dacapo.experiments.tasks.dummy_task
- dacapo.experiments.tasks.dummy_task_config
- dacapo.experiments.tasks.evaluators
- dacapo.experiments.tasks.evaluators.binary_segmentation_evaluation_scores
- dacapo.experiments.tasks.evaluators.binary_segmentation_evaluator
- dacapo.experiments.tasks.evaluators.dummy_evaluation_scores
- dacapo.experiments.tasks.evaluators.dummy_evaluator
- dacapo.experiments.tasks.evaluators.evaluation_scores
- dacapo.experiments.tasks.evaluators.evaluator
- dacapo.experiments.tasks.evaluators.instance_evaluation_scores
- dacapo.experiments.tasks.evaluators.instance_evaluator
- dacapo.experiments.tasks.hot_distance_task
- dacapo.experiments.tasks.hot_distance_task_config
- dacapo.experiments.tasks.inner_distance_task
- dacapo.experiments.tasks.inner_distance_task_config
- dacapo.experiments.tasks.losses
- dacapo.experiments.tasks.one_hot_task
- dacapo.experiments.tasks.one_hot_task_config
- dacapo.experiments.tasks.post_processors
- dacapo.experiments.tasks.post_processors.argmax_post_processor
- dacapo.experiments.tasks.post_processors.argmax_post_processor_parameters
- dacapo.experiments.tasks.post_processors.dummy_post_processor
- dacapo.experiments.tasks.post_processors.dummy_post_processor_parameters
- dacapo.experiments.tasks.post_processors.post_processor
- dacapo.experiments.tasks.post_processors.post_processor_parameters
- dacapo.experiments.tasks.post_processors.threshold_post_processor
- dacapo.experiments.tasks.post_processors.threshold_post_processor_parameters
- dacapo.experiments.tasks.post_processors.watershed_post_processor
- dacapo.experiments.tasks.post_processors.watershed_post_processor_parameters
- dacapo.experiments.tasks.predictors
- dacapo.experiments.tasks.predictors.affinities_predictor
- dacapo.experiments.tasks.predictors.distance_predictor
- dacapo.experiments.tasks.predictors.dummy_predictor
- dacapo.experiments.tasks.predictors.hot_distance_predictor
- dacapo.experiments.tasks.predictors.inner_distance_predictor
- dacapo.experiments.tasks.predictors.one_hot_predictor
- dacapo.experiments.tasks.predictors.predictor
- dacapo.experiments.tasks.pretrained_task
- dacapo.experiments.tasks.pretrained_task_config
- dacapo.experiments.tasks.task
- dacapo.experiments.tasks.task_config
- dacapo.experiments.trainers
- dacapo.experiments.trainers.dummy_trainer
- dacapo.experiments.trainers.dummy_trainer_config
- dacapo.experiments.trainers.gp_augments
- dacapo.experiments.trainers.gp_augments.augment_config
- dacapo.experiments.trainers.gp_augments.elastic_config
- dacapo.experiments.trainers.gp_augments.gamma_config
- dacapo.experiments.trainers.gp_augments.intensity_config
- dacapo.experiments.trainers.gp_augments.intensity_scale_shift_config
- dacapo.experiments.trainers.gp_augments.simple_config
- dacapo.experiments.trainers.gunpowder_trainer
- dacapo.experiments.trainers.gunpowder_trainer_config
- dacapo.experiments.trainers.optimizers
- dacapo.experiments.trainers.trainer
- dacapo.experiments.trainers.trainer_config
- dacapo.experiments.training_iteration_stats
- dacapo.experiments.training_stats
- dacapo.experiments.validation_iteration_scores
- dacapo.experiments.validation_scores
- dacapo.experiments.architectures
- dacapo.ext
- dacapo.gp
- dacapo.options
- dacapo.plot
- dacapo.predict
- dacapo.predict_local
- dacapo.store
- dacapo.store.array_store
- dacapo.store.config_store
- dacapo.store.conversion_hooks
- dacapo.store.converter
- dacapo.store.create_store
- dacapo.store.file_config_store
- dacapo.store.file_stats_store
- dacapo.store.local_array_store
- dacapo.store.local_weights_store
- dacapo.store.mongo_config_store
- dacapo.store.mongo_stats_store
- dacapo.store.stats_store
- dacapo.store.weights_store
- dacapo.tmp
- dacapo.train
- dacapo.utils
- dacapo.validate